Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.33■□□□□ 0.21
SMOQ99835 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SMOQ99835 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMOQ99835 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.33■□□□□ 0.21
SMOQ99835 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
SMOQ99835 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SMOQ99835 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SMOQ99835 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
SMOQ99835 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.33■□□□□ 0.2
SMOQ99835 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SMOQ99835 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.33■□□□□ 0.2
SMOQ99835 U91328.1-201ENST00000437528 223 ntBASIC16.33■□□□□ 0.2
SMOQ99835 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 AC007389.4-201ENST00000454674 793 ntBASIC16.33■□□□□ 0.2
SMOQ99835 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.33■□□□□ 0.2
SMOQ99835 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SMOQ99835 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.33■□□□□ 0.2
SMOQ99835 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SMOQ99835 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.33■□□□□ 0.2
SMOQ99835 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.33■□□□□ 0.2
SMOQ99835 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 AL138799.1-201ENST00000448213 1675 ntBASIC16.33■□□□□ 0.2
SMOQ99835 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMOQ99835 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.33■□□□□ 0.2
SMOQ99835 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMOQ99835 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.33■□□□□ 0.2
SMOQ99835 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.33■□□□□ 0.2
SMOQ99835 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SMOQ99835 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SMOQ99835 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SMOQ99835 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.32■□□□□ 0.2
SMOQ99835 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.32■□□□□ 0.2
SMOQ99835 ACTG1P3-201ENST00000431775 1114 ntBASIC16.32■□□□□ 0.2
SMOQ99835 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.32■□□□□ 0.2
SMOQ99835 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.32■□□□□ 0.2
SMOQ99835 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.32■□□□□ 0.2
SMOQ99835 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
SMOQ99835 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.32■□□□□ 0.2
SMOQ99835 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.32■□□□□ 0.2
SMOQ99835 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.32■□□□□ 0.2
SMOQ99835 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SMOQ99835 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 MIR5189-201ENST00000577370 114 ntBASIC16.32■□□□□ 0.2
SMOQ99835 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.32■□□□□ 0.2
SMOQ99835 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.32■□□□□ 0.2
SMOQ99835 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.32■□□□□ 0.2
SMOQ99835 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 AC136621.1-201ENST00000624017 2304 ntBASIC16.32■□□□□ 0.2
SMOQ99835 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.32■□□□□ 0.2
SMOQ99835 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.32■□□□□ 0.2
SMOQ99835 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.32■□□□□ 0.2
SMOQ99835 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMOQ99835 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.31■□□□□ 0.2
SMOQ99835 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.31■□□□□ 0.2
SMOQ99835 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMOQ99835 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms