Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC85AQ96PX6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85AQ96PX6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 CICP13-201ENST00000422015 2789 ntBASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 GNRHR2-203ENST00000581100 1187 ntBASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 AL118508.1-201ENST00000613502 2345 ntBASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85AQ96PX6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms