Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 FAAHP1-202ENST00000446499 1238 ntBASIC13.97□□□□□ -0.17
RFT1Q96AA3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 CICP14-201ENST00000629111 2732 ntBASIC13.97□□□□□ -0.17
RFT1Q96AA3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.97□□□□□ -0.17
RFT1Q96AA3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFT1Q96AA3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 AC087386.2-201ENST00000623212 4637 ntBASIC13.96□□□□□ -0.17
RFT1Q96AA3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 AC018845.2-201ENST00000568326 409 ntBASIC13.96□□□□□ -0.17
RFT1Q96AA3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 MIR3909-201ENST00000579518 119 ntBASIC13.96□□□□□ -0.17
RFT1Q96AA3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 AL009183.1-201ENST00000603760 355 ntBASIC13.96□□□□□ -0.17
RFT1Q96AA3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.96□□□□□ -0.17
RFT1Q96AA3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RFT1Q96AA3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFT1Q96AA3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.96□□□□□ -0.18
RFT1Q96AA3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFT1Q96AA3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.18
RFT1Q96AA3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFT1Q96AA3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFT1Q96AA3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.96□□□□□ -0.18
RFT1Q96AA3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFT1Q96AA3 AC041040.2-201ENST00000622926 2899 ntBASIC13.96□□□□□ -0.18
RFT1Q96AA3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.96□□□□□ -0.18
RFT1Q96AA3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFT1Q96AA3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFT1Q96AA3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RFT1Q96AA3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RFT1Q96AA3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RFT1Q96AA3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFT1Q96AA3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms