Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 AC244517.3-201ENST00000616254 1235 ntBASIC16.16■□□□□ 0.18
SCG3Q8WXD2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 AP3S2-216ENST00000617003 1561 ntBASIC16.16■□□□□ 0.18
SCG3Q8WXD2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.16■□□□□ 0.18
SCG3Q8WXD2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 AC023908.3-201ENST00000564211 3047 ntBASIC16.15■□□□□ 0.18
SCG3Q8WXD2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 AL353705.2-201ENST00000428243 662 ntBASIC16.15■□□□□ 0.18
SCG3Q8WXD2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 SPTSSB-204ENST00000617024 1292 ntBASIC16.15■□□□□ 0.18
SCG3Q8WXD2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.15■□□□□ 0.18
SCG3Q8WXD2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.14■□□□□ 0.18
SCG3Q8WXD2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
SCG3Q8WXD2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 AC241585.1-201ENST00000433527 519 ntBASIC16.14■□□□□ 0.17
SCG3Q8WXD2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 AC027369.6-201ENST00000525520 931 ntBASIC16.14■□□□□ 0.17
SCG3Q8WXD2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 AC007967.4-201ENST00000614700 386 ntBASIC16.14■□□□□ 0.17
SCG3Q8WXD2 AC073592.8-201ENST00000624126 511 ntBASIC16.14■□□□□ 0.17
SCG3Q8WXD2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SCG3Q8WXD2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms