Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 TSSK5P-201ENST00000423978 907 ntBASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AC044860.1-202ENST00000559481 777 ntBASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AC074044.1-201ENST00000609673 707 ntBASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 MST1L-201ENST00000442552 2185 ntBASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AP002414.2-201ENST00000591780 3365 ntBASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 AC006058.4-201ENST00000624016 1670 ntBASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDH19Q8TAB3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 SDHAP3-202ENST00000515467 728 ntBASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 AC138761.1-201ENST00000584393 385 ntBASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 AC023024.2-201ENST00000623561 1993 ntBASIC16.17■□□□□ 0.18
PCDH19Q8TAB3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 AC148477.4-201ENST00000613430 1793 ntBASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDH19Q8TAB3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms