Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 AC018712.1-201ENST00000455767 687 ntBASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 AC092910.1-201ENST00000482027 1129 ntBASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 KRT18P34-201ENST00000488218 1270 ntBASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 AC105339.3-201ENST00000560043 636 ntBASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 AC008735.5-201ENST00000623544 497 ntBASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 AC004790.2-201ENST00000623588 572 ntBASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RFWD2Q8NHY2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 AC006504.5-208ENST00000588784 2401 ntBASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 AC012640.2-201ENST00000561606 901 ntBASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 AL031432.2-201ENST00000566714 459 ntBASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 AL928711.1-201ENST00000570165 459 ntBASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 AL121894.2-201ENST00000602977 491 ntBASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 AL773604.1-201ENST00000617417 272 ntBASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 BNIP3P1-202ENST00000550043 1585 ntBASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RFWD2Q8NHY2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms