Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 AL513210.1-201ENST00000629608 234 ntBASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.99■□□□□ 0.15
CFAP61Q8NHU2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 CNN2P11-201ENST00000429351 262 ntBASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 SLC25A39P2-201ENST00000537614 270 ntBASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 LINC01225-203ENST00000563550 1244 ntBASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 AP000842.3-202ENST00000569238 1080 ntBASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 AC004835.2-201ENST00000603762 682 ntBASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 SPTSSB-204ENST00000617024 1292 ntBASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 AL589702.1-201ENST00000641229 1509 ntBASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.98■□□□□ 0.15
CFAP61Q8NHU2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 KRT18P32-201ENST00000424695 1287 ntBASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 DNAJB3-202ENST00000449667 1266 ntBASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 AP000344.2-201ENST00000512987 629 ntBASIC15.97■□□□□ 0.15
CFAP61Q8NHU2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms