Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 ILF3-AS1-201ENST00000591501 1983 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 AC100827.2-201ENST00000563214 1194 ntBASIC21.15■□□□□ 0.98
XRN1Q8IZH2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 NAP1L6-202ENST00000641404 1222 ntBASIC21.15■□□□□ 0.98
XRN1Q8IZH2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
XRN1Q8IZH2 LINC02447-202ENST00000501888 2146 ntBASIC21.15■□□□□ 0.98
XRN1Q8IZH2 MST1L-201ENST00000442552 2185 ntBASIC21.14■□□□□ 0.98
XRN1Q8IZH2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
XRN1Q8IZH2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC21.14■□□□□ 0.98
XRN1Q8IZH2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
XRN1Q8IZH2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
XRN1Q8IZH2 KRT8P21-201ENST00000430398 1491 ntBASIC21.14■□□□□ 0.97
XRN1Q8IZH2 AC020916.1-201ENST00000587762 1774 ntBASIC21.14■□□□□ 0.97
XRN1Q8IZH2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 AC127383.1-201ENST00000444697 1800 ntBASIC21.14■□□□□ 0.97
XRN1Q8IZH2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 OR2K2-202ENST00000374428 1038 ntBASIC21.14■□□□□ 0.97
XRN1Q8IZH2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 AC005962.1-201ENST00000584100 773 ntBASIC21.14■□□□□ 0.97
XRN1Q8IZH2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.14■□□□□ 0.97
XRN1Q8IZH2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 REXO1L4P-201ENST00000605109 1937 ntBASIC21.13■□□□□ 0.97
XRN1Q8IZH2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 PTK2-225ENST00000520892 571 ntTSL 4 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 DUX4L46-201ENST00000566845 751 ntBASIC21.13■□□□□ 0.97
XRN1Q8IZH2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 AC087045.2-201ENST00000606279 1003 ntBASIC21.13■□□□□ 0.97
XRN1Q8IZH2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRN1Q8IZH2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms