Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 AC233702.3-201ENST00000578656 1387 ntBASIC13.11□□□□□ -0.31
ZNF546Q86UE3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 TCAF1P1-201ENST00000414990 2232 ntBASIC13.11□□□□□ -0.31
ZNF546Q86UE3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 ARMC10P1-201ENST00000313754 855 ntBASIC13.11□□□□□ -0.31
ZNF546Q86UE3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 AC087641.1-201ENST00000557561 1021 ntBASIC13.11□□□□□ -0.31
ZNF546Q86UE3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 AL353135.1-201ENST00000606729 504 ntBASIC13.11□□□□□ -0.31
ZNF546Q86UE3 AC114341.1-201ENST00000618070 349 ntBASIC13.11□□□□□ -0.31
ZNF546Q86UE3 REXO1L3P-201ENST00000622202 1288 ntBASIC13.11□□□□□ -0.31
ZNF546Q86UE3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 AL160237.2-201ENST00000556165 472 ntBASIC13.1□□□□□ -0.31
ZNF546Q86UE3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 AC073592.4-201ENST00000623827 446 ntBASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms