Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC232323.1-201ENST00000540724 2099 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 REXO1L5P-201ENST00000622260 2098 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 BNIP3P1-202ENST00000550043 1585 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC007326.2-201ENST00000624224 7579 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHFQ7M4L6 AC007191.1-201ENST00000623179 2995 ntBASIC14.25□□□□□ -0.13
SHFQ7M4L6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.25□□□□□ -0.13
SHFQ7M4L6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 AC098859.1-201ENST00000502915 1238 ntBASIC14.24□□□□□ -0.13
SHFQ7M4L6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 AC243562.2-201ENST00000561247 970 ntBASIC14.24□□□□□ -0.13
SHFQ7M4L6 PDPK2P-202ENST00000562415 1191 ntBASIC14.24□□□□□ -0.13
SHFQ7M4L6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.24□□□□□ -0.13
SHFQ7M4L6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.24□□□□□ -0.13
SHFQ7M4L6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
SHFQ7M4L6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHFQ7M4L6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 REXO1L1P-202ENST00000608646 1974 ntBASIC14.23□□□□□ -0.13
SHFQ7M4L6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 SBF1P1-201ENST00000444527 5631 ntBASIC14.23□□□□□ -0.13
SHFQ7M4L6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 AC073389.1-201ENST00000595595 795 ntBASIC14.23□□□□□ -0.13
SHFQ7M4L6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms