Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 CETN4P-206ENST00000642099 2168 ntBASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AC023157.3-201ENST00000619086 2088 ntBASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AL138828.2-201ENST00000615812 383 ntBASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 SPDYE12P-201ENST00000618416 771 ntBASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AC093028.1-201ENST00000622998 982 ntBASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AL033527.5-202ENST00000641632 1098 ntBASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 KRT18P28-201ENST00000453838 1332 ntBASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NHLRC1Q6VVB1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms