Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.8□□□□□ -0.2
C11orf88Q6PI97 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.8□□□□□ -0.2
C11orf88Q6PI97 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 PGAM5P1-201ENST00000518923 814 ntBASIC13.8□□□□□ -0.2
C11orf88Q6PI97 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 AC012640.2-201ENST00000561606 901 ntBASIC13.8□□□□□ -0.2
C11orf88Q6PI97 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 TOP3BP1-201ENST00000420768 1380 ntBASIC13.8□□□□□ -0.2
C11orf88Q6PI97 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 PCGF3-213ENST00000620529 1899 ntBASIC13.8□□□□□ -0.2
C11orf88Q6PI97 KRT8P39-201ENST00000396270 1433 ntBASIC13.8□□□□□ -0.2
C11orf88Q6PI97 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.8□□□□□ -0.2
C11orf88Q6PI97 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 AC004832.2-201ENST00000426397 482 ntBASIC13.79□□□□□ -0.2
C11orf88Q6PI97 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.79□□□□□ -0.2
C11orf88Q6PI97 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 AL031731.1-201ENST00000642131 2094 ntBASIC13.79□□□□□ -0.2
C11orf88Q6PI97 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.79□□□□□ -0.2
C11orf88Q6PI97 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 LINC00528-201ENST00000600723 2160 ntBASIC13.78□□□□□ -0.2
C11orf88Q6PI97 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms