Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 LIN28AP1-201ENST00000429574 405 ntBASIC11.91□□□□□ -0.5
MRPL54Q6P161 ATP5G1P1-201ENST00000448724 379 ntBASIC11.91□□□□□ -0.5
MRPL54Q6P161 KRT18P38-201ENST00000449496 1282 ntBASIC11.91□□□□□ -0.5
MRPL54Q6P161 AC091607.1-201ENST00000490318 1060 ntBASIC11.91□□□□□ -0.5
MRPL54Q6P161 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 AP000867.4-201ENST00000641616 219 ntBASIC11.91□□□□□ -0.5
MRPL54Q6P161 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 AC004899.2-201ENST00000622993 3860 ntBASIC11.9□□□□□ -0.5
MRPL54Q6P161 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 INTS4P1-201ENST00000438455 1935 ntBASIC11.9□□□□□ -0.5
MRPL54Q6P161 MBLAC2-202ENST00000514906 1936 ntBASIC11.9□□□□□ -0.5
MRPL54Q6P161 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 PAWRP1-201ENST00000451083 565 ntBASIC11.9□□□□□ -0.5
MRPL54Q6P161 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 AC010331.1-201ENST00000611423 582 ntBASIC11.9□□□□□ -0.5
MRPL54Q6P161 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
MRPL54Q6P161 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL54Q6P161 AC097359.2-201ENST00000604992 2389 ntBASIC11.9□□□□□ -0.51
MRPL54Q6P161 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms