Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
USH1GQ495M9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.94■□□□□ 0.46
USH1GQ495M9 AC008741.2-201ENST00000612792 3115 ntBASIC17.94■□□□□ 0.46
USH1GQ495M9 DRD5P1-201ENST00000456605 1438 ntBASIC17.94■□□□□ 0.46
USH1GQ495M9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.94■□□□□ 0.46
USH1GQ495M9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
USH1GQ495M9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USH1GQ495M9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USH1GQ495M9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
USH1GQ495M9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USH1GQ495M9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USH1GQ495M9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USH1GQ495M9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USH1GQ495M9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 AC008894.3-201ENST00000624324 3103 ntBASIC17.93■□□□□ 0.46
USH1GQ495M9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
USH1GQ495M9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
USH1GQ495M9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
USH1GQ495M9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.93■□□□□ 0.46
USH1GQ495M9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.93■□□□□ 0.46
USH1GQ495M9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.93■□□□□ 0.46
USH1GQ495M9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.93■□□□□ 0.46
USH1GQ495M9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.93■□□□□ 0.46
USH1GQ495M9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
USH1GQ495M9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
USH1GQ495M9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
USH1GQ495M9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.93■□□□□ 0.46
USH1GQ495M9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USH1GQ495M9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 AC018665.1-201ENST00000622927 1362 ntBASIC17.92■□□□□ 0.46
USH1GQ495M9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
USH1GQ495M9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.92■□□□□ 0.46
USH1GQ495M9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.92■□□□□ 0.46
USH1GQ495M9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
USH1GQ495M9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.92■□□□□ 0.46
USH1GQ495M9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
USH1GQ495M9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.92■□□□□ 0.46
USH1GQ495M9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.92■□□□□ 0.46
USH1GQ495M9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.92■□□□□ 0.46
USH1GQ495M9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
USH1GQ495M9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
USH1GQ495M9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.92■□□□□ 0.46
USH1GQ495M9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.92■□□□□ 0.46
USH1GQ495M9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.92■□□□□ 0.46
USH1GQ495M9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
USH1GQ495M9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.92■□□□□ 0.46
USH1GQ495M9 AC106886.1-201ENST00000568660 600 ntBASIC17.92■□□□□ 0.46
USH1GQ495M9 CLUHP6-201ENST00000580789 941 ntBASIC17.92■□□□□ 0.46
USH1GQ495M9 AL359881.2-201ENST00000602973 570 ntBASIC17.92■□□□□ 0.46
USH1GQ495M9 AL512343.1-201ENST00000605837 169 ntBASIC17.92■□□□□ 0.46
USH1GQ495M9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
USH1GQ495M9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 MSTO2P-201ENST00000314835 1709 ntBASIC17.92■□□□□ 0.46
USH1GQ495M9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
USH1GQ495M9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USH1GQ495M9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
USH1GQ495M9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USH1GQ495M9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms