Protein–RNA interactions for Protein: Q3BBV0

NBPF1, Neuroblastoma breakpoint family member 1, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1Q3BBV0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 AL158070.2-201ENST00000623713 1621 ntBASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 AC078819.1-201ENST00000547454 765 ntBASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 AC012085.1-201ENST00000548270 765 ntBASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF1Q3BBV0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 CICP11-201ENST00000434745 2827 ntBASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 PAUPAR-201ENST00000630360 2965 ntBASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 MIR1908-201ENST00000410394 80 ntBASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF1Q3BBV0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 AC007950.2-201ENST00000615045 2347 ntBASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 AL590640.2-201ENST00000457038 527 ntBASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF1Q3BBV0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms