Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 AL645939.2-201ENST00000427340 991 ntBASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 CHCHD2P8-201ENST00000429873 447 ntBASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 KRT18P35-201ENST00000510488 1269 ntBASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 Z69720.1-201ENST00000601483 472 ntBASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 AL589182.2-201ENST00000619332 1049 ntBASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC6LQ2NKX8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 IER3-202ENST00000376377 1350 ntBASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 KRT17P6-201ENST00000453795 1220 ntBASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 AC152010.1-201ENST00000415779 2006 ntBASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC6LQ2NKX8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 AL356585.2-201ENST00000625078 2396 ntBASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 IGHV3-47-201ENST00000425060 335 ntBASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 AP005117.1-201ENST00000584346 1413 ntBASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC6LQ2NKX8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms