Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH1Q08174 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH1Q08174 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDH1Q08174 AL512361.1-201ENST00000554200 418 ntBASIC15.14■□□□□ 0.01
PCDH1Q08174 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH1Q08174 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCDH1Q08174 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PCDH1Q08174 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDH1Q08174 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDH1Q08174 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDH1Q08174 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDH1Q08174 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH1Q08174 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDH1Q08174 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 AL133267.1-201ENST00000398220 340 ntBASIC15.13■□□□□ 0.01
PCDH1Q08174 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDH1Q08174 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 AC107890.1-201ENST00000422478 521 ntBASIC15.13■□□□□ 0.01
PCDH1Q08174 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDH1Q08174 SDHAP3-202ENST00000515467 728 ntBASIC15.13■□□□□ 0.01
PCDH1Q08174 AC069120.2-201ENST00000524091 540 ntBASIC15.13■□□□□ 0.01
PCDH1Q08174 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 AC084364.1-201ENST00000551967 1556 ntBASIC15.13■□□□□ 0.01
PCDH1Q08174 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 AC074044.1-201ENST00000609673 707 ntBASIC15.13■□□□□ 0.01
PCDH1Q08174 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDH1Q08174 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 AL645728.2-202ENST00000641679 227 ntBASIC15.13■□□□□ 0.01
PCDH1Q08174 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms