Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMAD3P84022 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD3P84022 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.78■□□□□ 0.28
SMAD3P84022 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.78■□□□□ 0.28
SMAD3P84022 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.78■□□□□ 0.28
SMAD3P84022 AL161670.2-201ENST00000557650 1227 ntBASIC16.78■□□□□ 0.28
SMAD3P84022 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD3P84022 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.78■□□□□ 0.28
SMAD3P84022 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD3P84022 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD3P84022 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SMAD3P84022 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.78■□□□□ 0.28
SMAD3P84022 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.78■□□□□ 0.28
SMAD3P84022 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.78■□□□□ 0.28
SMAD3P84022 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD3P84022 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD3P84022 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD3P84022 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD3P84022 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD3P84022 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD3P84022 AL592424.1-201ENST00000563624 1536 ntBASIC16.77■□□□□ 0.28
SMAD3P84022 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.77■□□□□ 0.28
SMAD3P84022 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.77■□□□□ 0.28
SMAD3P84022 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD3P84022 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SMAD3P84022 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD3P84022 AC011742.3-201ENST00000439053 820 ntBASIC16.77■□□□□ 0.28
SMAD3P84022 AC098935.1-201ENST00000446057 611 ntBASIC16.77■□□□□ 0.28
SMAD3P84022 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.77■□□□□ 0.28
SMAD3P84022 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.77■□□□□ 0.28
SMAD3P84022 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.77■□□□□ 0.28
SMAD3P84022 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SMAD3P84022 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.77■□□□□ 0.28
SMAD3P84022 AC073352.2-201ENST00000609385 439 ntBASIC16.77■□□□□ 0.28
SMAD3P84022 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD3P84022 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SMAD3P84022 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.77■□□□□ 0.28
SMAD3P84022 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.77■□□□□ 0.27
SMAD3P84022 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SMAD3P84022 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMAD3P84022 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.77■□□□□ 0.27
SMAD3P84022 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.77■□□□□ 0.27
SMAD3P84022 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMAD3P84022 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SMAD3P84022 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.76■□□□□ 0.27
SMAD3P84022 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SMAD3P84022 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.76■□□□□ 0.27
SMAD3P84022 PHKG1P2-201ENST00000457537 863 ntBASIC16.76■□□□□ 0.27
SMAD3P84022 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.76■□□□□ 0.27
SMAD3P84022 AC005740.2-201ENST00000511085 419 ntBASIC16.76■□□□□ 0.27
SMAD3P84022 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.76■□□□□ 0.27
SMAD3P84022 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.76■□□□□ 0.27
SMAD3P84022 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SMAD3P84022 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.76■□□□□ 0.27
SMAD3P84022 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.76■□□□□ 0.27
SMAD3P84022 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SMAD3P84022 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.76■□□□□ 0.27
SMAD3P84022 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SMAD3P84022 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SMAD3P84022 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD3P84022 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
SMAD3P84022 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD3P84022 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SMAD3P84022 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD3P84022 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD3P84022 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.75■□□□□ 0.27
SMAD3P84022 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD3P84022 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SMAD3P84022 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD3P84022 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD3P84022 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SMAD3P84022 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD3P84022 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMAD3P84022 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.75■□□□□ 0.27
SMAD3P84022 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms