Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
NKX6-1P78426 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-1P78426 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
NKX6-1P78426 SPDYE17-201ENST00000412399 783 ntBASIC13.91□□□□□ -0.18
NKX6-1P78426 AL080243.2-201ENST00000418783 582 ntBASIC13.91□□□□□ -0.18
NKX6-1P78426 AC093004.1-201ENST00000508850 424 ntBASIC13.91□□□□□ -0.18
NKX6-1P78426 DOC2GP-202ENST00000514950 1163 ntBASIC13.91□□□□□ -0.18
NKX6-1P78426 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.91□□□□□ -0.18
NKX6-1P78426 AC106886.1-201ENST00000568660 600 ntBASIC13.91□□□□□ -0.18
NKX6-1P78426 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.91□□□□□ -0.18
NKX6-1P78426 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NKX6-1P78426 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-1P78426 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX6-1P78426 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX6-1P78426 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NKX6-1P78426 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NKX6-1P78426 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
NKX6-1P78426 DBET-201ENST00000630918 3363 ntBASIC13.9□□□□□ -0.18
NKX6-1P78426 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NKX6-1P78426 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX6-1P78426 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NKX6-1P78426 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NKX6-1P78426 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.9□□□□□ -0.18
NKX6-1P78426 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NKX6-1P78426 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.9□□□□□ -0.18
NKX6-1P78426 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
NKX6-1P78426 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.9□□□□□ -0.18
NKX6-1P78426 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.9□□□□□ -0.18
NKX6-1P78426 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX6-1P78426 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NKX6-1P78426 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 AC097376.2-205ENST00000610159 5334 ntBASIC13.9□□□□□ -0.18
NKX6-1P78426 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NKX6-1P78426 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX6-1P78426 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX6-1P78426 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NKX6-1P78426 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NKX6-1P78426 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
NKX6-1P78426 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.9□□□□□ -0.19
NKX6-1P78426 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NKX6-1P78426 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NKX6-1P78426 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NKX6-1P78426 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX6-1P78426 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms