Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
YBX1P67809 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.29■□□□□ 0.04
YBX1P67809 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.29■□□□□ 0.04
YBX1P67809 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.29■□□□□ 0.04
YBX1P67809 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.29■□□□□ 0.04
YBX1P67809 AL512638.1-201ENST00000457493 794 ntBASIC15.29■□□□□ 0.04
YBX1P67809 INGX-202ENST00000489074 768 ntBASIC15.29■□□□□ 0.04
YBX1P67809 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.29■□□□□ 0.04
YBX1P67809 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.29■□□□□ 0.04
YBX1P67809 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.29■□□□□ 0.04
YBX1P67809 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.29■□□□□ 0.04
YBX1P67809 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.29■□□□□ 0.04
YBX1P67809 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.29■□□□□ 0.04
YBX1P67809 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.29■□□□□ 0.04
YBX1P67809 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.29■□□□□ 0.04
YBX1P67809 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.29■□□□□ 0.04
YBX1P67809 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 CICP23-201ENST00000605013 2741 ntBASIC15.29■□□□□ 0.04
YBX1P67809 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
YBX1P67809 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.29■□□□□ 0.04
YBX1P67809 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
YBX1P67809 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.28■□□□□ 0.04
YBX1P67809 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.28■□□□□ 0.04
YBX1P67809 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.28■□□□□ 0.04
YBX1P67809 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
YBX1P67809 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
YBX1P67809 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.28■□□□□ 0.04
YBX1P67809 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.28■□□□□ 0.04
YBX1P67809 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.28■□□□□ 0.04
YBX1P67809 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
YBX1P67809 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 FAM8A3P-201ENST00000427218 844 ntBASIC15.28■□□□□ 0.04
YBX1P67809 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.28■□□□□ 0.04
YBX1P67809 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
YBX1P67809 AL589987.1-201ENST00000453380 819 ntBASIC15.28■□□□□ 0.04
YBX1P67809 SERBP1P3-201ENST00000459980 809 ntBASIC15.28■□□□□ 0.04
YBX1P67809 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.28■□□□□ 0.04
YBX1P67809 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.28■□□□□ 0.04
YBX1P67809 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.28■□□□□ 0.04
YBX1P67809 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.28■□□□□ 0.04
YBX1P67809 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.28■□□□□ 0.04
YBX1P67809 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.28■□□□□ 0.04
YBX1P67809 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.28■□□□□ 0.04
YBX1P67809 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.28■□□□□ 0.04
YBX1P67809 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
YBX1P67809 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
YBX1P67809 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.28■□□□□ 0.04
YBX1P67809 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
YBX1P67809 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
YBX1P67809 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YBX1P67809 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
YBX1P67809 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.27■□□□□ 0.04
YBX1P67809 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.27■□□□□ 0.04
YBX1P67809 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.27■□□□□ 0.04
YBX1P67809 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.27■□□□□ 0.04
YBX1P67809 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 AC136604.1-201ENST00000418535 575 ntBASIC15.27■□□□□ 0.04
YBX1P67809 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.27■□□□□ 0.04
YBX1P67809 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
YBX1P67809 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms