Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 MIR4492-201ENST00000581627 80 ntBASIC13.08□□□□□ -0.32
RIPPLY3P57055 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 EIF5AP2-201ENST00000585668 1047 ntBASIC13.08□□□□□ -0.32
RIPPLY3P57055 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 LINC02199-201ENST00000506655 2702 ntBASIC13.07□□□□□ -0.32
RIPPLY3P57055 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 DDX39AP1-201ENST00000445147 1181 ntBASIC13.07□□□□□ -0.32
RIPPLY3P57055 RPL18P13-201ENST00000478088 569 ntBASIC13.07□□□□□ -0.32
RIPPLY3P57055 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 NUP210P1-202ENST00000504322 710 ntBASIC13.07□□□□□ -0.32
RIPPLY3P57055 AC019193.1-201ENST00000506678 823 ntBASIC13.07□□□□□ -0.32
RIPPLY3P57055 FAM86KP-201ENST00000509817 987 ntBASIC13.07□□□□□ -0.32
RIPPLY3P57055 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 RN7SL574P-201ENST00000581512 297 ntBASIC13.07□□□□□ -0.32
RIPPLY3P57055 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 AL096828.3-201ENST00000615354 462 ntBASIC13.07□□□□□ -0.32
RIPPLY3P57055 MME-218ENST00000625667 363 ntTSL 5 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 AL135999.2-201ENST00000622438 1686 ntBASIC13.07□□□□□ -0.32
RIPPLY3P57055 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.07□□□□□ -0.32
RIPPLY3P57055 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RIPPLY3P57055 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.06□□□□□ -0.32
RIPPLY3P57055 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RIPPLY3P57055 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RIPPLY3P57055 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RIPPLY3P57055 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RIPPLY3P57055 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms