Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.98□□□□□ -0.01
NR1H2P55055 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NR1H2P55055 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NR1H2P55055 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NR1H2P55055 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.98□□□□□ -0.01
NR1H2P55055 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.98□□□□□ -0.01
NR1H2P55055 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 REXO1L1P-202ENST00000608646 1974 ntBASIC14.98□□□□□ -0.01
NR1H2P55055 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.98□□□□□ -0.01
NR1H2P55055 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NR1H2P55055 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NR1H2P55055 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.97□□□□□ -0.01
NR1H2P55055 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NR1H2P55055 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H2P55055 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H2P55055 PTCHD3P3-201ENST00000403073 906 ntBASIC14.97□□□□□ -0.01
NR1H2P55055 KRT18P2-201ENST00000447938 1258 ntBASIC14.97□□□□□ -0.01
NR1H2P55055 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.97□□□□□ -0.01
NR1H2P55055 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.97□□□□□ -0.01
NR1H2P55055 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
NR1H2P55055 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
NR1H2P55055 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
NR1H2P55055 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 KRT8P39-201ENST00000396270 1433 ntBASIC14.97□□□□□ -0.01
NR1H2P55055 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.97□□□□□ -0.01
NR1H2P55055 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.97□□□□□ -0.01
NR1H2P55055 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NR1H2P55055 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
NR1H2P55055 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.96□□□□□ -0.01
NR1H2P55055 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H2P55055 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H2P55055 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.96□□□□□ -0.01
NR1H2P55055 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.96□□□□□ -0.01
NR1H2P55055 GPAA1P2-202ENST00000606848 1787 ntBASIC14.96□□□□□ -0.01
NR1H2P55055 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.96□□□□□ -0.01
NR1H2P55055 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H2P55055 AC126335.2-201ENST00000623362 4637 ntBASIC14.96□□□□□ -0.01
NR1H2P55055 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H2P55055 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H2P55055 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H2P55055 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NR1H2P55055 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NR1H2P55055 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.96□□□□□ -0.01
NR1H2P55055 AP006288.1-201ENST00000446065 395 ntBASIC14.96□□□□□ -0.01
NR1H2P55055 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.96□□□□□ -0.01
NR1H2P55055 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
NR1H2P55055 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.96□□□□□ -0.01
NR1H2P55055 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms