Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RPL5P28-201ENST00000418634 693 ntBASIC15.72■□□□□ 0.11
NUBP1P53384 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
NUBP1P53384 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
NUBP1P53384 NUP210P1-202ENST00000504322 710 ntBASIC15.72■□□□□ 0.11
NUBP1P53384 AC016550.1-201ENST00000505348 785 ntBASIC15.72■□□□□ 0.11
NUBP1P53384 AC022217.1-201ENST00000521069 738 ntBASIC15.72■□□□□ 0.11
NUBP1P53384 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.72■□□□□ 0.11
NUBP1P53384 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC15.72■□□□□ 0.11
NUBP1P53384 MTND3P12-201ENST00000559068 328 ntBASIC15.72■□□□□ 0.11
NUBP1P53384 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.72■□□□□ 0.11
NUBP1P53384 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
NUBP1P53384 LINC01198-206ENST00000595532 1125 ntBASIC15.72■□□□□ 0.11
NUBP1P53384 AL133499.1-201ENST00000596207 608 ntBASIC15.72■□□□□ 0.11
NUBP1P53384 MIR6756-201ENST00000616240 63 ntBASIC15.72■□□□□ 0.11
NUBP1P53384 AL023803.2-201ENST00000620080 638 ntBASIC15.72■□□□□ 0.11
NUBP1P53384 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.72■□□□□ 0.11
NUBP1P53384 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUBP1P53384 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.72■□□□□ 0.11
NUBP1P53384 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUBP1P53384 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NUBP1P53384 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NUBP1P53384 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NUBP1P53384 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUBP1P53384 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.71■□□□□ 0.11
NUBP1P53384 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.71■□□□□ 0.11
NUBP1P53384 AL023775.1-201ENST00000454907 1746 ntBASIC15.71■□□□□ 0.11
NUBP1P53384 CBWD3-206ENST00000478048 1736 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.71■□□□□ 0.11
NUBP1P53384 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.71■□□□□ 0.11
NUBP1P53384 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 TPM3P8-201ENST00000330554 643 ntBASIC15.71■□□□□ 0.11
NUBP1P53384 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NUBP1P53384 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.71■□□□□ 0.11
NUBP1P53384 AC026316.1-201ENST00000398900 414 ntBASIC15.71■□□□□ 0.11
NUBP1P53384 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC15.71■□□□□ 0.11
NUBP1P53384 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC15.71■□□□□ 0.11
NUBP1P53384 AC005740.2-201ENST00000511085 419 ntBASIC15.71■□□□□ 0.11
NUBP1P53384 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC15.71■□□□□ 0.11
NUBP1P53384 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NUBP1P53384 Y_RNA.717-201ENST00000517106 92 ntBASIC15.71■□□□□ 0.11
NUBP1P53384 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC15.71■□□□□ 0.11
NUBP1P53384 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.71■□□□□ 0.11
NUBP1P53384 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
NUBP1P53384 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC15.71■□□□□ 0.11
NUBP1P53384 AL139353.2-201ENST00000549844 699 ntTSL 3 BASIC15.71■□□□□ 0.11
NUBP1P53384 AC093334.1-201ENST00000559904 423 ntTSL 3 BASIC15.71■□□□□ 0.11
NUBP1P53384 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.71■□□□□ 0.11
NUBP1P53384 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.71■□□□□ 0.11
NUBP1P53384 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.71■□□□□ 0.11
NUBP1P53384 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC15.71■□□□□ 0.11
NUBP1P53384 AL645939.5-201ENST00000606834 243 ntBASIC15.71■□□□□ 0.11
NUBP1P53384 AC100847.1-201ENST00000611316 481 ntBASIC15.71■□□□□ 0.11
NUBP1P53384 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 AC003001.2-201ENST00000616294 831 ntBASIC15.71■□□□□ 0.11
NUBP1P53384 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC15.71■□□□□ 0.11
NUBP1P53384 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.71■□□□□ 0.11
NUBP1P53384 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
NUBP1P53384 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUBP1P53384 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
NUBP1P53384 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.71■□□□□ 0.1
NUBP1P53384 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
NUBP1P53384 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NUBP1P53384 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NUBP1P53384 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NUBP1P53384 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUBP1P53384 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.7■□□□□ 0.1
NUBP1P53384 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.7■□□□□ 0.1
NUBP1P53384 AL138688.1-201ENST00000624851 1594 ntBASIC15.7■□□□□ 0.1
NUBP1P53384 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NUBP1P53384 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUBP1P53384 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NUBP1P53384 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUBP1P53384 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUBP1P53384 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUBP1P53384 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUBP1P53384 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUBP1P53384 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.7■□□□□ 0.1
NUBP1P53384 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.7■□□□□ 0.1
NUBP1P53384 AC007613.1-201ENST00000572811 2597 ntBASIC15.7■□□□□ 0.1
NUBP1P53384 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUBP1P53384 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUBP1P53384 AC244453.4-201ENST00000419150 388 ntBASIC15.7■□□□□ 0.1
NUBP1P53384 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.7■□□□□ 0.1
NUBP1P53384 MORF4L1P7-201ENST00000426038 703 ntBASIC15.7■□□□□ 0.1
NUBP1P53384 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms