RNA–Protein interactions for RNA: ENST00000616294.1

AC003001.2-201, humanhuman

BASIC

Gene AC003001.2, Length 831 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.2-201ENST00000616294 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
AC003001.2-201ENST00000616294 CHIC1Q5VXU3 224 aa29.02■■■□□ 2.24
AC003001.2-201ENST00000616294 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
AC003001.2-201ENST00000616294 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
AC003001.2-201ENST00000616294 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
AC003001.2-201ENST00000616294 FOXD1Q16676 465 aa23.11■■□□□ 1.29
AC003001.2-201ENST00000616294 ADRA2BP18089 450 aa22.47■■□□□ 1.19
AC003001.2-201ENST00000616294 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
AC003001.2-201ENST00000616294 PIAS4Q8N2W9 510 aaPredicted RBP21.91■■□□□ 1.1
AC003001.2-201ENST00000616294 MSH5O43196 834 aa21.28■■□□□ 1
AC003001.2-201ENST00000616294 PPP4R3CPQ6ZMV5 832 aa20.94■□□□□ 0.94
AC003001.2-201ENST00000616294 KCNA4P22459 653 aa20.71■□□□□ 0.91
AC003001.2-201ENST00000616294 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
AC003001.2-201ENST00000616294 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
AC003001.2-201ENST00000616294 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
AC003001.2-201ENST00000616294 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
AC003001.2-201ENST00000616294 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
AC003001.2-201ENST00000616294 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
AC003001.2-201ENST00000616294 SLC4A1APQ9BWU0 796 aaKnown RBP19.83■□□□□ 0.77
AC003001.2-201ENST00000616294 RNF216Q9NWF9 866 aaPredicted RBP19.82■□□□□ 0.76
AC003001.2-201ENST00000616294 HOXD11P31277 338 aaPredicted RBP19.64■□□□□ 0.73
AC003001.2-201ENST00000616294 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
AC003001.2-201ENST00000616294 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
AC003001.2-201ENST00000616294 DCAF8L1A6NGE4 600 aa19.19■□□□□ 0.66
AC003001.2-201ENST00000616294 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
AC003001.2-201ENST00000616294 FOXD4L1Q9NU39 408 aa19.02■□□□□ 0.64
AC003001.2-201ENST00000616294 ZBTB22O15209 634 aa19■□□□□ 0.63
AC003001.2-201ENST00000616294 SLC4A2P04920 1241 aa18.91■□□□□ 0.62
AC003001.2-201ENST00000616294 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
AC003001.2-201ENST00000616294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
AC003001.2-201ENST00000616294 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
AC003001.2-201ENST00000616294 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
AC003001.2-201ENST00000616294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.42■□□□□ 0.54
AC003001.2-201ENST00000616294 HNRNPUL2Q1KMD3 747 aaKnown RBP18.42■□□□□ 0.54
AC003001.2-201ENST00000616294 ATXN8OSP0DMR3 200 aa18.36■□□□□ 0.53
AC003001.2-201ENST00000616294 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
AC003001.2-201ENST00000616294 APLP2Q06481 763 aa18.2■□□□□ 0.5
AC003001.2-201ENST00000616294 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
AC003001.2-201ENST00000616294 C1QBPQ07021 282 aaKnown RBP18.05■□□□□ 0.48
AC003001.2-201ENST00000616294 ATF5Q9Y2D1 282 aaPredicted RBP18.05■□□□□ 0.48
AC003001.2-201ENST00000616294 CAPN15O75808 1086 aa17.86■□□□□ 0.45
AC003001.2-201ENST00000616294 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
AC003001.2-201ENST00000616294 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
AC003001.2-201ENST00000616294 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
AC003001.2-201ENST00000616294 CACNB1Q02641 598 aaPredicted RBP17.62■□□□□ 0.41
AC003001.2-201ENST00000616294 POLA2Q14181 598 aa17.58■□□□□ 0.4
AC003001.2-201ENST00000616294 ABCB7O75027 752 aa17.5■□□□□ 0.39
AC003001.2-201ENST00000616294 DSG3P32926 999 aa17.42■□□□□ 0.38
AC003001.2-201ENST00000616294 FBLN2P98095 1184 aa17.42■□□□□ 0.38
AC003001.2-201ENST00000616294 FKBP8Q14318 412 aa17.36■□□□□ 0.37
AC003001.2-201ENST00000616294 ZBTB12Q9Y330 459 aaPredicted RBP17.36■□□□□ 0.37
AC003001.2-201ENST00000616294 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
AC003001.2-201ENST00000616294 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
AC003001.2-201ENST00000616294 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
AC003001.2-201ENST00000616294 SPDYE2BA6NHP3 402 aa16.88■□□□□ 0.29
AC003001.2-201ENST00000616294 SPDYE6P0CI01 402 aa16.88■□□□□ 0.29
AC003001.2-201ENST00000616294 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
AC003001.2-201ENST00000616294 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
AC003001.2-201ENST00000616294 PROM2Q8N271 834 aa16.76■□□□□ 0.27
AC003001.2-201ENST00000616294 FBXO3Q9UK99 471 aa16.75■□□□□ 0.27
AC003001.2-201ENST00000616294 SSUH2Q9Y2M2 353 aa16.71■□□□□ 0.27
AC003001.2-201ENST00000616294 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
AC003001.2-201ENST00000616294 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
AC003001.2-201ENST00000616294 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
AC003001.2-201ENST00000616294 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
AC003001.2-201ENST00000616294 VASPP50552 380 aaPredicted RBP16.43■□□□□ 0.22
AC003001.2-201ENST00000616294 SPDYE1Q8NFV5 336 aaPredicted RBP16.33■□□□□ 0.2
AC003001.2-201ENST00000616294 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
AC003001.2-201ENST00000616294 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
AC003001.2-201ENST00000616294 PLCD3Q8N3E9 789 aa16.26■□□□□ 0.19
AC003001.2-201ENST00000616294 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
AC003001.2-201ENST00000616294 MIER1Q8N108 512 aa16.25■□□□□ 0.19
AC003001.2-201ENST00000616294 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
AC003001.2-201ENST00000616294 IFNLR1Q8IU57 520 aaPredicted RBP16.2■□□□□ 0.18
AC003001.2-201ENST00000616294 RTN4Q9NQC3 1192 aaKnown RBP16.2■□□□□ 0.18
AC003001.2-201ENST00000616294 KLHL34Q8N239 644 aa16.19■□□□□ 0.18
AC003001.2-201ENST00000616294 PRR29P0C7W0 189 aa16.16■□□□□ 0.18
AC003001.2-201ENST00000616294 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
AC003001.2-201ENST00000616294 ZBTB47Q9UFB7 747 aaPredicted RBP16.07■□□□□ 0.16
AC003001.2-201ENST00000616294 SPOCK2Q92563 424 aa16.04■□□□□ 0.16
AC003001.2-201ENST00000616294 CREBZFQ9NS37 354 aa15.93■□□□□ 0.14
AC003001.2-201ENST00000616294 CHRDL2Q6WN34 429 aa15.82■□□□□ 0.12
AC003001.2-201ENST00000616294 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
AC003001.2-201ENST00000616294 CHADLQ6NUI6 762 aa15.77■□□□□ 0.12
AC003001.2-201ENST00000616294 CIZ1Q9ULV3 898 aaPredicted RBP15.77■□□□□ 0.12
AC003001.2-201ENST00000616294 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
AC003001.2-201ENST00000616294 MNX1P50219 401 aaPredicted RBP15.75■□□□□ 0.11
AC003001.2-201ENST00000616294 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
AC003001.2-201ENST00000616294 PKD2Q13563 968 aa15.74■□□□□ 0.11
AC003001.2-201ENST00000616294 NUBP1P53384 320 aa15.71■□□□□ 0.11
AC003001.2-201ENST00000616294 GSE1Q14687 1217 aa15.7■□□□□ 0.1
AC003001.2-201ENST00000616294 ECM2O94769 699 aaPredicted RBP15.69■□□□□ 0.1
AC003001.2-201ENST00000616294 DCAF8Q5TAQ9 597 aa15.69■□□□□ 0.1
AC003001.2-201ENST00000616294 PIP4P2Q8N4L2 257 aa15.68■□□□□ 0.1
AC003001.2-201ENST00000616294 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
AC003001.2-201ENST00000616294 FAM212AQ96EL1 285 aa15.65■□□□□ 0.1
AC003001.2-201ENST00000616294 DCAF8L2P0C7V8 631 aa15.62■□□□□ 0.09
AC003001.2-201ENST00000616294 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
AC003001.2-201ENST00000616294 RASEFQ8IZ41 740 aa15.58■□□□□ 0.08
AC003001.2-201ENST00000616294 TSPYL2Q9H2G4 693 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms