Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 KRT8P22-201ENST00000562317 1415 ntBASIC15.23■□□□□ 0.03
PDX1P52945 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 BNIP3P1-202ENST00000550043 1585 ntBASIC15.23■□□□□ 0.03
PDX1P52945 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 PAUPAR-201ENST00000630360 2965 ntBASIC15.22■□□□□ 0.03
PDX1P52945 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PDX1P52945 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PDX1P52945 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 KRT18P64-201ENST00000434946 1219 ntBASIC15.22■□□□□ 0.03
PDX1P52945 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 FAM86LP-201ENST00000478302 853 ntBASIC15.22■□□□□ 0.03
PDX1P52945 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.22■□□□□ 0.03
PDX1P52945 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.22■□□□□ 0.03
PDX1P52945 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.22■□□□□ 0.03
PDX1P52945 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.22■□□□□ 0.03
PDX1P52945 AC124283.3-201ENST00000570869 594 ntBASIC15.22■□□□□ 0.03
PDX1P52945 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.22■□□□□ 0.03
PDX1P52945 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
PDX1P52945 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PDX1P52945 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.22■□□□□ 0.03
PDX1P52945 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.22■□□□□ 0.03
PDX1P52945 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDX1P52945 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PDX1P52945 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
PDX1P52945 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PDX1P52945 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.21■□□□□ 0.03
PDX1P52945 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PDX1P52945 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.21■□□□□ 0.03
PDX1P52945 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.21■□□□□ 0.03
PDX1P52945 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.21■□□□□ 0.03
PDX1P52945 ACTG1P3-201ENST00000431775 1114 ntBASIC15.21■□□□□ 0.03
PDX1P52945 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.21■□□□□ 0.03
PDX1P52945 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PDX1P52945 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.21■□□□□ 0.03
PDX1P52945 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.21■□□□□ 0.03
PDX1P52945 AC133539.2-201ENST00000604757 467 ntBASIC15.21■□□□□ 0.03
PDX1P52945 AL606495.2-201ENST00000605867 535 ntBASIC15.21■□□□□ 0.03
PDX1P52945 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PDX1P52945 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDX1P52945 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDX1P52945 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PDX1P52945 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.21■□□□□ 0.02
PDX1P52945 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PDX1P52945 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDX1P52945 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms