Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.46□□□□□ -0.41
CDC34P49427 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.46□□□□□ -0.41
CDC34P49427 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.46□□□□□ -0.41
CDC34P49427 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.46□□□□□ -0.41
CDC34P49427 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.46□□□□□ -0.41
CDC34P49427 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.46□□□□□ -0.41
CDC34P49427 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CDC34P49427 MIR4515-201ENST00000584082 81 ntBASIC12.46□□□□□ -0.41
CDC34P49427 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.46□□□□□ -0.41
CDC34P49427 MTDHP3-201ENST00000594186 672 ntBASIC12.46□□□□□ -0.41
CDC34P49427 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CDC34P49427 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
CDC34P49427 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
CDC34P49427 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
CDC34P49427 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CDC34P49427 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.46□□□□□ -0.42
CDC34P49427 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.46□□□□□ -0.42
CDC34P49427 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CDC34P49427 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CDC34P49427 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.46□□□□□ -0.42
CDC34P49427 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.46□□□□□ -0.42
CDC34P49427 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.46□□□□□ -0.42
CDC34P49427 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.46□□□□□ -0.42
CDC34P49427 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
CDC34P49427 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CDC34P49427 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
CDC34P49427 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.45□□□□□ -0.42
CDC34P49427 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CDC34P49427 AC041040.2-201ENST00000622926 2899 ntBASIC12.45□□□□□ -0.42
CDC34P49427 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
CDC34P49427 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.45□□□□□ -0.42
CDC34P49427 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.45□□□□□ -0.42
CDC34P49427 FAM8A3P-201ENST00000427218 844 ntBASIC12.45□□□□□ -0.42
CDC34P49427 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.45□□□□□ -0.42
CDC34P49427 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.45□□□□□ -0.42
CDC34P49427 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.45□□□□□ -0.42
CDC34P49427 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.45□□□□□ -0.42
CDC34P49427 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 AC138894.3-201ENST00000603787 634 ntBASIC12.45□□□□□ -0.42
CDC34P49427 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CDC34P49427 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.45□□□□□ -0.42
CDC34P49427 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CDC34P49427 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CDC34P49427 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms