Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 GPR53P-205ENST00000457298 1084 ntBASIC14.78□□□□□ -0.04
GABRA4P48169 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.78□□□□□ -0.04
GABRA4P48169 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.78□□□□□ -0.04
GABRA4P48169 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.78□□□□□ -0.04
GABRA4P48169 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.78□□□□□ -0.04
GABRA4P48169 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.78□□□□□ -0.04
GABRA4P48169 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
GABRA4P48169 SLC25A47P1-201ENST00000531577 414 ntBASIC14.78□□□□□ -0.04
GABRA4P48169 TDH-203ENST00000531764 1110 ntBASIC14.78□□□□□ -0.04
GABRA4P48169 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.78□□□□□ -0.04
GABRA4P48169 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 AP001063.1-201ENST00000568332 529 ntBASIC14.78□□□□□ -0.04
GABRA4P48169 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.78□□□□□ -0.04
GABRA4P48169 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.78□□□□□ -0.04
GABRA4P48169 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.78□□□□□ -0.04
GABRA4P48169 AL512343.1-201ENST00000605837 169 ntBASIC14.78□□□□□ -0.04
GABRA4P48169 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
GABRA4P48169 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.78□□□□□ -0.04
GABRA4P48169 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 AC105250.1-201ENST00000509378 2057 ntBASIC14.78□□□□□ -0.04
GABRA4P48169 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 AP003680.1-201ENST00000598970 3660 ntBASIC14.78□□□□□ -0.04
GABRA4P48169 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GABRA4P48169 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
GABRA4P48169 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
GABRA4P48169 AL138799.1-201ENST00000448213 1675 ntBASIC14.77□□□□□ -0.04
GABRA4P48169 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.77□□□□□ -0.04
GABRA4P48169 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.77□□□□□ -0.04
GABRA4P48169 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRA4P48169 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRA4P48169 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRA4P48169 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRA4P48169 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
GABRA4P48169 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRA4P48169 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GABRA4P48169 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRA4P48169 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.77□□□□□ -0.04
GABRA4P48169 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GABRA4P48169 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.77□□□□□ -0.04
GABRA4P48169 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
GABRA4P48169 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
GABRA4P48169 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GABRA4P48169 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.77□□□□□ -0.04
GABRA4P48169 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GABRA4P48169 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.77□□□□□ -0.05
GABRA4P48169 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
GABRA4P48169 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 AP001889.1-201ENST00000525414 633 ntBASIC14.77□□□□□ -0.05
GABRA4P48169 AC068587.3-201ENST00000526613 355 ntBASIC14.77□□□□□ -0.05
GABRA4P48169 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.77□□□□□ -0.05
GABRA4P48169 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.77□□□□□ -0.05
GABRA4P48169 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.77□□□□□ -0.05
GABRA4P48169 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
GABRA4P48169 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GABRA4P48169 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GABRA4P48169 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.77□□□□□ -0.05
GABRA4P48169 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GABRA4P48169 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GABRA4P48169 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GABRA4P48169 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
GABRA4P48169 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRA4P48169 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GABRA4P48169 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.76□□□□□ -0.05
GABRA4P48169 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.76□□□□□ -0.05
GABRA4P48169 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
GABRA4P48169 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
GABRA4P48169 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRA4P48169 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRA4P48169 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GABRA4P48169 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms