Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP13P45452 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP13P45452 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.34■□□□□ 0.21
MMP13P45452 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP13P45452 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.34■□□□□ 0.21
MMP13P45452 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP13P45452 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP13P45452 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP13P45452 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.34■□□□□ 0.21
MMP13P45452 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.34■□□□□ 0.21
MMP13P45452 AC015911.4-201ENST00000588022 1070 ntBASIC16.34■□□□□ 0.21
MMP13P45452 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP13P45452 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
MMP13P45452 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP13P45452 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MMP13P45452 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP13P45452 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MMP13P45452 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP13P45452 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MMP13P45452 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP13P45452 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.34■□□□□ 0.21
MMP13P45452 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.33■□□□□ 0.21
MMP13P45452 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
MMP13P45452 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.33■□□□□ 0.21
MMP13P45452 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
MMP13P45452 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
MMP13P45452 AGAP7P-201ENST00000582299 2062 ntBASIC16.33■□□□□ 0.21
MMP13P45452 AGAP14-201ENST00000624701 2060 ntBASIC16.33■□□□□ 0.21
MMP13P45452 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.33■□□□□ 0.21
MMP13P45452 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
MMP13P45452 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP13P45452 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
MMP13P45452 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.33■□□□□ 0.2
MMP13P45452 FAM86GP-201ENST00000448322 971 ntBASIC16.33■□□□□ 0.2
MMP13P45452 AC092183.1-201ENST00000469884 875 ntBASIC16.33■□□□□ 0.2
MMP13P45452 AC125807.1-201ENST00000483097 614 ntBASIC16.33■□□□□ 0.2
MMP13P45452 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.33■□□□□ 0.2
MMP13P45452 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.33■□□□□ 0.2
MMP13P45452 AL133215.2-201ENST00000609242 977 ntBASIC16.33■□□□□ 0.2
MMP13P45452 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.33■□□□□ 0.2
MMP13P45452 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.33■□□□□ 0.2
MMP13P45452 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MMP13P45452 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MMP13P45452 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MMP13P45452 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.33■□□□□ 0.2
MMP13P45452 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MMP13P45452 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MMP13P45452 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MMP13P45452 CICP4-201ENST00000447359 2812 ntBASIC16.32■□□□□ 0.2
MMP13P45452 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP13P45452 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MMP13P45452 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP13P45452 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms