Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PBX3P40426 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 KRT8P35-201ENST00000483942 1338 ntBASIC16.64■□□□□ 0.25
PBX3P40426 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PBX3P40426 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PBX3P40426 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.63■□□□□ 0.25
PBX3P40426 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PBX3P40426 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PBX3P40426 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PBX3P40426 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PBX3P40426 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 KRT18P25-201ENST00000508931 1278 ntBASIC16.63■□□□□ 0.25
PBX3P40426 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.63■□□□□ 0.25
PBX3P40426 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.63■□□□□ 0.25
PBX3P40426 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.63■□□□□ 0.25
PBX3P40426 AC023310.1-201ENST00000554836 735 ntBASIC16.63■□□□□ 0.25
PBX3P40426 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.63■□□□□ 0.25
PBX3P40426 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.63■□□□□ 0.25
PBX3P40426 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.63■□□□□ 0.25
PBX3P40426 AC068587.10-201ENST00000641210 219 ntBASIC16.63■□□□□ 0.25
PBX3P40426 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PBX3P40426 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.63■□□□□ 0.25
PBX3P40426 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PBX3P40426 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PBX3P40426 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PBX3P40426 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 AC006001.1-201ENST00000325130 474 ntBASIC16.62■□□□□ 0.25
PBX3P40426 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 RNU1-114P-201ENST00000365297 166 ntBASIC16.62■□□□□ 0.25
PBX3P40426 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 MIR1202-201ENST00000408529 83 ntBASIC16.62■□□□□ 0.25
PBX3P40426 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.62■□□□□ 0.25
PBX3P40426 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.62■□□□□ 0.25
PBX3P40426 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.62■□□□□ 0.25
PBX3P40426 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.62■□□□□ 0.25
PBX3P40426 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.62■□□□□ 0.25
PBX3P40426 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.62■□□□□ 0.25
PBX3P40426 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.62■□□□□ 0.25
PBX3P40426 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.62■□□□□ 0.25
PBX3P40426 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
PBX3P40426 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PBX3P40426 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.62■□□□□ 0.25
PBX3P40426 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PBX3P40426 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PBX3P40426 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PBX3P40426 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PBX3P40426 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.61■□□□□ 0.25
PBX3P40426 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PBX3P40426 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PBX3P40426 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PBX3P40426 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PBX3P40426 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PBX3P40426 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms