Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
GDF1P27539 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
GDF1P27539 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GDF1P27539 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.21□□□□□ -0.13
GDF1P27539 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GDF1P27539 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.21□□□□□ -0.13
GDF1P27539 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
GDF1P27539 AL442647.2-201ENST00000429864 857 ntBASIC14.21□□□□□ -0.13
GDF1P27539 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.21□□□□□ -0.13
GDF1P27539 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.21□□□□□ -0.13
GDF1P27539 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.21□□□□□ -0.13
GDF1P27539 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.21□□□□□ -0.13
GDF1P27539 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.21□□□□□ -0.13
GDF1P27539 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GDF1P27539 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.21□□□□□ -0.13
GDF1P27539 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.21□□□□□ -0.13
GDF1P27539 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.21□□□□□ -0.13
GDF1P27539 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.21□□□□□ -0.13
GDF1P27539 IGHV3-72-202ENST00000621503 303 ntBASIC14.21□□□□□ -0.13
GDF1P27539 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.21□□□□□ -0.13
GDF1P27539 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDF1P27539 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.21□□□□□ -0.14
GDF1P27539 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.21□□□□□ -0.14
GDF1P27539 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
GDF1P27539 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GDF1P27539 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GDF1P27539 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
GDF1P27539 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GDF1P27539 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.2□□□□□ -0.14
GDF1P27539 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
GDF1P27539 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GDF1P27539 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 AL391005.1-201ENST00000623953 2435 ntBASIC14.2□□□□□ -0.14
GDF1P27539 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GDF1P27539 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.2□□□□□ -0.14
GDF1P27539 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 AL133267.1-201ENST00000398220 340 ntBASIC14.2□□□□□ -0.14
GDF1P27539 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GDF1P27539 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 AC134915.1-201ENST00000426461 574 ntBASIC14.2□□□□□ -0.14
GDF1P27539 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.2□□□□□ -0.14
GDF1P27539 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.2□□□□□ -0.14
GDF1P27539 TTTY23B-201ENST00000442790 549 ntBASIC14.2□□□□□ -0.14
GDF1P27539 RN7SL837P-201ENST00000463010 287 ntBASIC14.2□□□□□ -0.14
GDF1P27539 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.2□□□□□ -0.14
GDF1P27539 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.2□□□□□ -0.14
GDF1P27539 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.2□□□□□ -0.14
GDF1P27539 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.2□□□□□ -0.14
GDF1P27539 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.2□□□□□ -0.14
GDF1P27539 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 INTS4P2-202ENST00000614726 2019 ntBASIC14.2□□□□□ -0.14
GDF1P27539 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GDF1P27539 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GDF1P27539 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.2□□□□□ -0.14
GDF1P27539 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms