Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL1P22362 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CCL1P22362 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 CICP11-201ENST00000434745 2827 ntBASIC13.49□□□□□ -0.25
CCL1P22362 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL1P22362 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL1P22362 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCL1P22362 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CCL1P22362 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CCL1P22362 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.48□□□□□ -0.25
CCL1P22362 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL1P22362 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.48□□□□□ -0.25
CCL1P22362 AL589739.1-201ENST00000607720 493 ntBASIC13.48□□□□□ -0.25
CCL1P22362 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 AL033527.5-202ENST00000641632 1098 ntBASIC13.48□□□□□ -0.25
CCL1P22362 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
CCL1P22362 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCL1P22362 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CCL1P22362 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCL1P22362 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCL1P22362 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.48□□□□□ -0.25
CCL1P22362 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL1P22362 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCL1P22362 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL1P22362 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CCL1P22362 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CCL1P22362 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCL1P22362 AC104457.1-201ENST00000401024 814 ntBASIC13.47□□□□□ -0.25
CCL1P22362 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL1P22362 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL1P22362 UPF3AP3-201ENST00000420996 769 ntBASIC13.47□□□□□ -0.25
CCL1P22362 BX842568.4-201ENST00000421222 227 ntBASIC13.47□□□□□ -0.25
CCL1P22362 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL1P22362 RPL13P2-201ENST00000440687 659 ntBASIC13.47□□□□□ -0.25
CCL1P22362 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL1P22362 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL1P22362 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL1P22362 AC010327.4-202ENST00000591484 748 ntBASIC13.47□□□□□ -0.25
CCL1P22362 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.47□□□□□ -0.25
CCL1P22362 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.47□□□□□ -0.25
CCL1P22362 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
CCL1P22362 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms