Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 AC105233.2-201ENST00000523697 349 ntBASIC13.82□□□□□ -0.2
ATF1P18846 AF228730.5-201ENST00000530288 346 ntBASIC13.82□□□□□ -0.2
ATF1P18846 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.82□□□□□ -0.2
ATF1P18846 AC243562.2-201ENST00000561247 970 ntBASIC13.82□□□□□ -0.2
ATF1P18846 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.82□□□□□ -0.2
ATF1P18846 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.82□□□□□ -0.2
ATF1P18846 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.82□□□□□ -0.2
ATF1P18846 AC099522.2-201ENST00000607001 744 ntBASIC13.82□□□□□ -0.2
ATF1P18846 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
ATF1P18846 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.82□□□□□ -0.2
ATF1P18846 ZNF259P1-201ENST00000407656 1365 ntBASIC13.82□□□□□ -0.2
ATF1P18846 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.82□□□□□ -0.2
ATF1P18846 ZBED1P1-201ENST00000502364 1930 ntBASIC13.82□□□□□ -0.2
ATF1P18846 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ATF1P18846 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.81□□□□□ -0.2
ATF1P18846 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ATF1P18846 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ATF1P18846 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ATF1P18846 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.81□□□□□ -0.2
ATF1P18846 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.81□□□□□ -0.2
ATF1P18846 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.81□□□□□ -0.2
ATF1P18846 RNA5SP416-201ENST00000516838 111 ntBASIC13.81□□□□□ -0.2
ATF1P18846 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.81□□□□□ -0.2
ATF1P18846 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ATF1P18846 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.81□□□□□ -0.2
ATF1P18846 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ATF1P18846 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.81□□□□□ -0.2
ATF1P18846 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 IL9RP2-201ENST00000423948 1312 ntBASIC13.81□□□□□ -0.2
ATF1P18846 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ATF1P18846 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATF1P18846 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms