Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.84■□□□□ 0.13
VCLP18206 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VCLP18206 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.84■□□□□ 0.13
VCLP18206 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VCLP18206 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
VCLP18206 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
VCLP18206 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VCLP18206 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
VCLP18206 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VCLP18206 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VCLP18206 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.83■□□□□ 0.13
VCLP18206 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
VCLP18206 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.83■□□□□ 0.12
VCLP18206 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VCLP18206 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
VCLP18206 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.83■□□□□ 0.12
VCLP18206 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.83■□□□□ 0.12
VCLP18206 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.83■□□□□ 0.12
VCLP18206 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.83■□□□□ 0.12
VCLP18206 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.83■□□□□ 0.12
VCLP18206 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.83■□□□□ 0.12
VCLP18206 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.83■□□□□ 0.12
VCLP18206 BANF1P1-201ENST00000553684 263 ntBASIC15.83■□□□□ 0.12
VCLP18206 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.83■□□□□ 0.12
VCLP18206 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VCLP18206 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.83■□□□□ 0.12
VCLP18206 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.83■□□□□ 0.12
VCLP18206 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.83■□□□□ 0.12
VCLP18206 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
VCLP18206 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VCLP18206 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.83■□□□□ 0.12
VCLP18206 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VCLP18206 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.83■□□□□ 0.12
VCLP18206 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
VCLP18206 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VCLP18206 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.83■□□□□ 0.12
VCLP18206 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
VCLP18206 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.82■□□□□ 0.12
VCLP18206 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.82■□□□□ 0.12
VCLP18206 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VCLP18206 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
VCLP18206 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.82■□□□□ 0.12
VCLP18206 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
VCLP18206 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 AC004987.2-201ENST00000395959 1148 ntBASIC15.82■□□□□ 0.12
VCLP18206 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.82■□□□□ 0.12
VCLP18206 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.82■□□□□ 0.12
VCLP18206 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.82■□□□□ 0.12
VCLP18206 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.82■□□□□ 0.12
VCLP18206 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.82■□□□□ 0.12
VCLP18206 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
VCLP18206 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.82■□□□□ 0.12
VCLP18206 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.82■□□□□ 0.12
VCLP18206 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.82■□□□□ 0.12
VCLP18206 AL133215.2-201ENST00000609242 977 ntBASIC15.82■□□□□ 0.12
VCLP18206 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.82■□□□□ 0.12
VCLP18206 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.82■□□□□ 0.12
VCLP18206 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VCLP18206 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 AP001282.1-201ENST00000531301 1499 ntBASIC15.82■□□□□ 0.12
VCLP18206 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VCLP18206 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.82■□□□□ 0.12
VCLP18206 PRAL-201ENST00000624952 3286 ntBASIC15.82■□□□□ 0.12
VCLP18206 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms