Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN1P18031 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN1P18031 AC005034.1-201ENST00000426657 489 ntBASIC16.57■□□□□ 0.24
PTPN1P18031 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN1P18031 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN1P18031 GAPDHP21-201ENST00000450301 1010 ntBASIC16.57■□□□□ 0.24
PTPN1P18031 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN1P18031 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.57■□□□□ 0.24
PTPN1P18031 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN1P18031 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN1P18031 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN1P18031 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN1P18031 AL049840.4-201ENST00000602422 811 ntBASIC16.57■□□□□ 0.24
PTPN1P18031 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN1P18031 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN1P18031 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN1P18031 AL035252.4-201ENST00000624174 288 ntBASIC16.57■□□□□ 0.24
PTPN1P18031 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN1P18031 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTPN1P18031 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN1P18031 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PTPN1P18031 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PTPN1P18031 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN1P18031 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN1P18031 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN1P18031 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTPN1P18031 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN1P18031 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTPN1P18031 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PTPN1P18031 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN1P18031 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
PTPN1P18031 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 AC063926.2-201ENST00000623766 1308 ntBASIC16.56■□□□□ 0.24
PTPN1P18031 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN1P18031 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 AC134915.1-201ENST00000426461 574 ntBASIC16.56■□□□□ 0.24
PTPN1P18031 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
PTPN1P18031 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.56■□□□□ 0.24
PTPN1P18031 VDAC1P7-201ENST00000462417 847 ntBASIC16.56■□□□□ 0.24
PTPN1P18031 RPL13AP25-201ENST00000484130 612 ntBASIC16.56■□□□□ 0.24
PTPN1P18031 AC011495.1-201ENST00000498085 584 ntBASIC16.56■□□□□ 0.24
PTPN1P18031 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN1P18031 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN1P18031 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN1P18031 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN1P18031 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN1P18031 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN1P18031 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN1P18031 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN1P18031 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PTPN1P18031 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN1P18031 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN1P18031 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PTPN1P18031 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN1P18031 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN1P18031 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN1P18031 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN1P18031 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTPN1P18031 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN1P18031 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN1P18031 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN1P18031 INE1-201ENST00000456273 945 ntBASIC16.55■□□□□ 0.24
PTPN1P18031 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 AL359711.2-201ENST00000563105 872 ntBASIC16.55■□□□□ 0.24
PTPN1P18031 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN1P18031 AC133539.2-201ENST00000604757 467 ntBASIC16.55■□□□□ 0.24
PTPN1P18031 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTPN1P18031 AL033527.5-201ENST00000641382 801 ntBASIC16.55■□□□□ 0.24
PTPN1P18031 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms