Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.17■□□□□ 0.82
MS4A1P11836 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 C18orf15-201ENST00000623680 2534 ntBASIC20.17■□□□□ 0.82
MS4A1P11836 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 AL390755.1-201ENST00000623716 2027 ntBASIC20.17■□□□□ 0.82
MS4A1P11836 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MS4A1P11836 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MS4A1P11836 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MS4A1P11836 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.16■□□□□ 0.82
MS4A1P11836 AC091951.1-201ENST00000512854 2465 ntBASIC20.16■□□□□ 0.82
MS4A1P11836 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MS4A1P11836 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
MS4A1P11836 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC20.16■□□□□ 0.82
MS4A1P11836 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MS4A1P11836 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MS4A1P11836 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MS4A1P11836 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.16■□□□□ 0.82
MS4A1P11836 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.16■□□□□ 0.82
MS4A1P11836 AC004967.1-201ENST00000453589 447 ntBASIC20.16■□□□□ 0.82
MS4A1P11836 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.16■□□□□ 0.82
MS4A1P11836 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MS4A1P11836 AC134684.3-201ENST00000641758 218 ntBASIC20.16■□□□□ 0.82
MS4A1P11836 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MS4A1P11836 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MS4A1P11836 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC20.16■□□□□ 0.82
MS4A1P11836 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.16■□□□□ 0.82
MS4A1P11836 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC20.16■□□□□ 0.82
MS4A1P11836 AL607033.1-201ENST00000623900 1599 ntBASIC20.16■□□□□ 0.82
MS4A1P11836 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
MS4A1P11836 GRK6P1-201ENST00000400595 1711 ntBASIC20.16■□□□□ 0.82
MS4A1P11836 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.16■□□□□ 0.82
MS4A1P11836 NORAD-201ENST00000565493 5339 ntBASIC20.16■□□□□ 0.82
MS4A1P11836 GPI-205ENST00000586425 1799 ntTSL 5 BASIC20.16■□□□□ 0.82
MS4A1P11836 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MS4A1P11836 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
MS4A1P11836 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MS4A1P11836 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.15■□□□□ 0.82
MS4A1P11836 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.15■□□□□ 0.82
MS4A1P11836 AC069262.1-201ENST00000539058 672 ntBASIC20.15■□□□□ 0.82
MS4A1P11836 AL079307.3-201ENST00000556114 283 ntBASIC20.15■□□□□ 0.82
MS4A1P11836 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MS4A1P11836 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC20.15■□□□□ 0.82
MS4A1P11836 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC20.15■□□□□ 0.82
MS4A1P11836 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MS4A1P11836 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MS4A1P11836 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
MS4A1P11836 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
MS4A1P11836 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
MS4A1P11836 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC20.14■□□□□ 0.82
MS4A1P11836 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MS4A1P11836 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MS4A1P11836 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MS4A1P11836 CETN4P-206ENST00000642099 2168 ntBASIC20.14■□□□□ 0.81
MS4A1P11836 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC20.14■□□□□ 0.81
MS4A1P11836 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MS4A1P11836 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.14■□□□□ 0.81
MS4A1P11836 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MS4A1P11836 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
MS4A1P11836 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MS4A1P11836 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MS4A1P11836 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MS4A1P11836 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.14■□□□□ 0.81
MS4A1P11836 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MS4A1P11836 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MS4A1P11836 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms