Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SNORD3B-2-202ENST00000571722 791 ntBASIC20.15■□□□□ 0.82
COL5A2P05997 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.15■□□□□ 0.82
COL5A2P05997 AL136295.7-201ENST00000619226 1200 ntBASIC20.15■□□□□ 0.82
COL5A2P05997 COX6A1P2-201ENST00000620597 330 ntBASIC20.15■□□□□ 0.82
COL5A2P05997 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COL5A2P05997 E2F3P2-201ENST00000447755 1422 ntBASIC20.15■□□□□ 0.82
COL5A2P05997 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.15■□□□□ 0.82
COL5A2P05997 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL5A2P05997 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.15■□□□□ 0.82
COL5A2P05997 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL5A2P05997 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL5A2P05997 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL5A2P05997 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.82
COL5A2P05997 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
COL5A2P05997 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
COL5A2P05997 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.14■□□□□ 0.82
COL5A2P05997 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL5A2P05997 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.14■□□□□ 0.81
COL5A2P05997 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.14■□□□□ 0.81
COL5A2P05997 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
COL5A2P05997 FZD10-202ENST00000539839 3282 ntBASIC20.14■□□□□ 0.81
COL5A2P05997 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
COL5A2P05997 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC20.14■□□□□ 0.81
COL5A2P05997 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 AC026316.1-201ENST00000398900 414 ntBASIC20.14■□□□□ 0.81
COL5A2P05997 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.14■□□□□ 0.81
COL5A2P05997 PUDPP3-201ENST00000445368 636 ntBASIC20.14■□□□□ 0.81
COL5A2P05997 AC114501.1-201ENST00000445949 172 ntBASIC20.14■□□□□ 0.81
COL5A2P05997 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 IGLV3-15-201ENST00000518356 244 ntBASIC20.14■□□□□ 0.81
COL5A2P05997 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC20.14■□□□□ 0.81
COL5A2P05997 AC132192.2-201ENST00000596206 1147 ntBASIC20.14■□□□□ 0.81
COL5A2P05997 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 FKBP4P6-201ENST00000457486 1332 ntBASIC20.14■□□□□ 0.81
COL5A2P05997 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL5A2P05997 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL5A2P05997 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.14■□□□□ 0.81
COL5A2P05997 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL5A2P05997 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.13■□□□□ 0.81
COL5A2P05997 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL5A2P05997 RN7SKP214-201ENST00000364208 315 ntBASIC20.13■□□□□ 0.81
COL5A2P05997 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.13■□□□□ 0.81
COL5A2P05997 RPL18P13-201ENST00000478088 569 ntBASIC20.13■□□□□ 0.81
COL5A2P05997 HLA-J-204ENST00000495278 958 ntBASIC20.13■□□□□ 0.81
COL5A2P05997 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.13■□□□□ 0.81
COL5A2P05997 AC090857.1-201ENST00000527400 390 ntBASIC20.13■□□□□ 0.81
COL5A2P05997 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 AC100827.2-201ENST00000563214 1194 ntBASIC20.13■□□□□ 0.81
COL5A2P05997 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
COL5A2P05997 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
COL5A2P05997 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.13■□□□□ 0.81
COL5A2P05997 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.13■□□□□ 0.81
COL5A2P05997 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
COL5A2P05997 AC138696.2-201ENST00000607376 223 ntBASIC20.13■□□□□ 0.81
COL5A2P05997 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.13■□□□□ 0.81
COL5A2P05997 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL5A2P05997 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL5A2P05997 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.13■□□□□ 0.81
COL5A2P05997 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.13■□□□□ 0.81
COL5A2P05997 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.13■□□□□ 0.81
COL5A2P05997 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
COL5A2P05997 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.13■□□□□ 0.81
COL5A2P05997 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL5A2P05997 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
COL5A2P05997 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
COL5A2P05997 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.12■□□□□ 0.81
COL5A2P05997 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
COL5A2P05997 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC20.12■□□□□ 0.81
COL5A2P05997 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.12■□□□□ 0.81
COL5A2P05997 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL5A2P05997 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.12■□□□□ 0.81
COL5A2P05997 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC20.12■□□□□ 0.81
COL5A2P05997 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
COL5A2P05997 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC20.12■□□□□ 0.81
COL5A2P05997 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.12■□□□□ 0.81
COL5A2P05997 AC103691.2-201ENST00000618824 433 ntBASIC20.12■□□□□ 0.81
COL5A2P05997 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COL5A2P05997 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
COL5A2P05997 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL5A2P05997 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL5A2P05997 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL5A2P05997 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL5A2P05997 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL5A2P05997 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms