Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-ND3P03897 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-ND3P03897 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-ND3P03897 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-ND3P03897 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MT-ND3P03897 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 LINC01101-201ENST00000622953 1884 ntBASIC16.06■□□□□ 0.16
MT-ND3P03897 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MT-ND3P03897 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.06■□□□□ 0.16
MT-ND3P03897 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MT-ND3P03897 AC092474.2-201ENST00000424288 719 ntBASIC16.06■□□□□ 0.16
MT-ND3P03897 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.06■□□□□ 0.16
MT-ND3P03897 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.06■□□□□ 0.16
MT-ND3P03897 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.06■□□□□ 0.16
MT-ND3P03897 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 SPDYE11-202ENST00000450699 704 ntBASIC16.06■□□□□ 0.16
MT-ND3P03897 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.06■□□□□ 0.16
MT-ND3P03897 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.06■□□□□ 0.16
MT-ND3P03897 SPDYE9P-201ENST00000570642 692 ntBASIC16.06■□□□□ 0.16
MT-ND3P03897 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.06■□□□□ 0.16
MT-ND3P03897 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.06■□□□□ 0.16
MT-ND3P03897 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.06■□□□□ 0.16
MT-ND3P03897 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 SPDYE10P-202ENST00000612005 668 ntBASIC16.06■□□□□ 0.16
MT-ND3P03897 SPDYE8P-202ENST00000612377 668 ntBASIC16.06■□□□□ 0.16
MT-ND3P03897 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MT-ND3P03897 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MT-ND3P03897 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MT-ND3P03897 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.06■□□□□ 0.16
MT-ND3P03897 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.06■□□□□ 0.16
MT-ND3P03897 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-ND3P03897 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-ND3P03897 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.05■□□□□ 0.16
MT-ND3P03897 TIMM8BP1-201ENST00000452384 211 ntBASIC16.05■□□□□ 0.16
MT-ND3P03897 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 HLA-J-203ENST00000494367 1087 ntBASIC16.05■□□□□ 0.16
MT-ND3P03897 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.05■□□□□ 0.16
MT-ND3P03897 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.05■□□□□ 0.16
MT-ND3P03897 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.05■□□□□ 0.16
MT-ND3P03897 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
MT-ND3P03897 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.05■□□□□ 0.16
MT-ND3P03897 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.05■□□□□ 0.16
MT-ND3P03897 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.05■□□□□ 0.16
MT-ND3P03897 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MT-ND3P03897 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
MT-ND3P03897 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.05■□□□□ 0.16
MT-ND3P03897 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms