Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
ZNF254O75437 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF254O75437 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.99□□□□□ -0.17
ZNF254O75437 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF254O75437 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 HLA-H-201ENST00000383620 1096 ntBASIC13.99□□□□□ -0.17
ZNF254O75437 AL645939.2-201ENST00000427340 991 ntBASIC13.99□□□□□ -0.17
ZNF254O75437 KRT18P3-201ENST00000451602 1288 ntBASIC13.99□□□□□ -0.17
ZNF254O75437 AL139010.1-201ENST00000454878 894 ntBASIC13.99□□□□□ -0.17
ZNF254O75437 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.99□□□□□ -0.17
ZNF254O75437 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.99□□□□□ -0.17
ZNF254O75437 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.99□□□□□ -0.17
ZNF254O75437 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.99□□□□□ -0.17
ZNF254O75437 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ZNF254O75437 AL450472.2-201ENST00000603663 1156 ntBASIC13.99□□□□□ -0.17
ZNF254O75437 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.99□□□□□ -0.17
ZNF254O75437 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF254O75437 AC005252.3-201ENST00000623855 2258 ntBASIC13.99□□□□□ -0.17
ZNF254O75437 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ZNF254O75437 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF254O75437 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF254O75437 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ZNF254O75437 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF254O75437 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
ZNF254O75437 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZNF254O75437 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 MIR346-201ENST00000362234 95 ntBASIC13.98□□□□□ -0.17
ZNF254O75437 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
ZNF254O75437 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF254O75437 MED15P5-201ENST00000423150 992 ntBASIC13.98□□□□□ -0.17
ZNF254O75437 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.98□□□□□ -0.17
ZNF254O75437 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF254O75437 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF254O75437 KRT8P23-201ENST00000560090 1207 ntBASIC13.98□□□□□ -0.17
ZNF254O75437 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.98□□□□□ -0.17
ZNF254O75437 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF254O75437 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZNF254O75437 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 AC092865.6-201ENST00000642101 219 ntBASIC13.98□□□□□ -0.17
ZNF254O75437 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
ZNF254O75437 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF254O75437 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF254O75437 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF254O75437 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF254O75437 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF254O75437 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
ZNF254O75437 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF254O75437 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZNF254O75437 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF254O75437 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF254O75437 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms