Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 ZBED1P1-201ENST00000502364 1930 ntBASIC12.86□□□□□ -0.35
SSSCA1O60232 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 AC073621.1-201ENST00000392730 636 ntBASIC12.86□□□□□ -0.35
SSSCA1O60232 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 ATP5G2P1-201ENST00000433580 426 ntBASIC12.86□□□□□ -0.35
SSSCA1O60232 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.86□□□□□ -0.35
SSSCA1O60232 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 KRT18P31-201ENST00000506277 1292 ntBASIC12.86□□□□□ -0.35
SSSCA1O60232 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 AL031432.2-201ENST00000566714 459 ntBASIC12.86□□□□□ -0.35
SSSCA1O60232 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 AL928711.1-201ENST00000570165 459 ntBASIC12.86□□□□□ -0.35
SSSCA1O60232 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.86□□□□□ -0.35
SSSCA1O60232 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.86□□□□□ -0.35
SSSCA1O60232 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 AC073439.1-201ENST00000624121 1774 ntBASIC12.85□□□□□ -0.35
SSSCA1O60232 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SSSCA1O60232 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 FAM185BP-201ENST00000443595 716 ntBASIC12.85□□□□□ -0.35
SSSCA1O60232 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.85□□□□□ -0.35
SSSCA1O60232 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.85□□□□□ -0.35
SSSCA1O60232 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.85□□□□□ -0.35
SSSCA1O60232 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 AL049597.2-201ENST00000565575 961 ntBASIC12.85□□□□□ -0.35
SSSCA1O60232 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms