Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LDB2O43679 RPL5P21-201ENST00000404620 815 ntBASIC15.66■□□□□ 0.1
LDB2O43679 MRPS18AP1-201ENST00000414458 589 ntBASIC15.66■□□□□ 0.1
LDB2O43679 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.66■□□□□ 0.1
LDB2O43679 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.66■□□□□ 0.1
LDB2O43679 SPDYE18-201ENST00000510091 1050 ntBASIC15.66■□□□□ 0.1
LDB2O43679 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LDB2O43679 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.66■□□□□ 0.1
LDB2O43679 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.66■□□□□ 0.1
LDB2O43679 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LDB2O43679 MIR3197-201ENST00000582241 73 ntBASIC15.66■□□□□ 0.1
LDB2O43679 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.66■□□□□ 0.1
LDB2O43679 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.66■□□□□ 0.1
LDB2O43679 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LDB2O43679 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LDB2O43679 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.66■□□□□ 0.1
LDB2O43679 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LDB2O43679 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LDB2O43679 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LDB2O43679 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
LDB2O43679 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 AL121723.1-201ENST00000445194 1519 ntBASIC15.65■□□□□ 0.1
LDB2O43679 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LDB2O43679 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LDB2O43679 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.65■□□□□ 0.1
LDB2O43679 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.65■□□□□ 0.1
LDB2O43679 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.65■□□□□ 0.1
LDB2O43679 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.65■□□□□ 0.1
LDB2O43679 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.65■□□□□ 0.1
LDB2O43679 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LDB2O43679 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.65■□□□□ 0.1
LDB2O43679 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LDB2O43679 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
LDB2O43679 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.65■□□□□ 0.1
LDB2O43679 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LDB2O43679 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.65■□□□□ 0.1
LDB2O43679 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.65■□□□□ 0.1
LDB2O43679 AC138969.3-201ENST00000546612 1459 ntBASIC15.65■□□□□ 0.1
LDB2O43679 AC138932.2-201ENST00000548268 1459 ntBASIC15.65■□□□□ 0.1
LDB2O43679 AC126755.4-201ENST00000549796 1459 ntBASIC15.65■□□□□ 0.1
LDB2O43679 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LDB2O43679 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.65■□□□□ 0.1
LDB2O43679 AC091951.1-201ENST00000512854 2465 ntBASIC15.65■□□□□ 0.1
LDB2O43679 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.64■□□□□ 0.09
LDB2O43679 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LDB2O43679 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.64■□□□□ 0.09
LDB2O43679 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LDB2O43679 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.64■□□□□ 0.09
LDB2O43679 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 AC093214.1-201ENST00000511688 1107 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms