Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.83□□□□□ -0.52
SNAI2O43623 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
SNAI2O43623 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.83□□□□□ -0.52
SNAI2O43623 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.83□□□□□ -0.52
SNAI2O43623 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 AC090616.6-203ENST00000579186 1945 ntBASIC11.83□□□□□ -0.52
SNAI2O43623 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.83□□□□□ -0.52
SNAI2O43623 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
SNAI2O43623 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.83□□□□□ -0.52
SNAI2O43623 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.83□□□□□ -0.52
SNAI2O43623 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.83□□□□□ -0.52
SNAI2O43623 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SNAI2O43623 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.83□□□□□ -0.52
SNAI2O43623 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SNAI2O43623 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SNAI2O43623 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 AL731571.1-201ENST00000617058 5428 ntBASIC11.82□□□□□ -0.52
SNAI2O43623 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
SNAI2O43623 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 AP002469.2-201ENST00000531724 424 ntBASIC11.82□□□□□ -0.52
SNAI2O43623 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.82□□□□□ -0.52
SNAI2O43623 AC021087.4-201ENST00000563761 564 ntBASIC11.82□□□□□ -0.52
SNAI2O43623 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SNAI2O43623 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 LINC01101-201ENST00000622953 1884 ntBASIC11.82□□□□□ -0.52
SNAI2O43623 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SNAI2O43623 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SNAI2O43623 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.82□□□□□ -0.52
SNAI2O43623 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SNAI2O43623 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms