Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
KCNQ3O43525 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.89■□□□□ 0.77
KCNQ3O43525 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.89■□□□□ 0.77
KCNQ3O43525 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.89■□□□□ 0.77
KCNQ3O43525 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KCNQ3O43525 GOLGA2P4-201ENST00000441462 777 ntBASIC19.89■□□□□ 0.77
KCNQ3O43525 TNRC18P3-201ENST00000441896 2691 ntBASIC19.89■□□□□ 0.77
KCNQ3O43525 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.89■□□□□ 0.77
KCNQ3O43525 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNQ3O43525 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.89■□□□□ 0.77
KCNQ3O43525 FAM8A2P-201ENST00000528813 1142 ntBASIC19.89■□□□□ 0.77
KCNQ3O43525 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
KCNQ3O43525 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
KCNQ3O43525 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.89■□□□□ 0.77
KCNQ3O43525 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.89■□□□□ 0.77
KCNQ3O43525 AL158070.2-201ENST00000623713 1621 ntBASIC19.89■□□□□ 0.77
KCNQ3O43525 AC132938.4-201ENST00000623835 848 ntBASIC19.89■□□□□ 0.77
KCNQ3O43525 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.89■□□□□ 0.77
KCNQ3O43525 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KCNQ3O43525 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNQ3O43525 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KCNQ3O43525 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KCNQ3O43525 AC092850.2-201ENST00000623821 2697 ntBASIC19.89■□□□□ 0.77
KCNQ3O43525 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
KCNQ3O43525 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KCNQ3O43525 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.88■□□□□ 0.77
KCNQ3O43525 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.88■□□□□ 0.77
KCNQ3O43525 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
KCNQ3O43525 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KCNQ3O43525 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.88■□□□□ 0.77
KCNQ3O43525 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 FAM86HP-204ENST00000513466 959 ntBASIC19.88■□□□□ 0.77
KCNQ3O43525 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KCNQ3O43525 AC079316.1-201ENST00000548397 411 ntBASIC19.88■□□□□ 0.77
KCNQ3O43525 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.88■□□□□ 0.77
KCNQ3O43525 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 MIR4741-201ENST00000579822 90 ntBASIC19.88■□□□□ 0.77
KCNQ3O43525 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.88■□□□□ 0.77
KCNQ3O43525 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.88■□□□□ 0.77
KCNQ3O43525 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.88■□□□□ 0.77
KCNQ3O43525 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.88■□□□□ 0.77
KCNQ3O43525 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNQ3O43525 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KCNQ3O43525 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KCNQ3O43525 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
KCNQ3O43525 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
KCNQ3O43525 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.87■□□□□ 0.77
KCNQ3O43525 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
KCNQ3O43525 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.87■□□□□ 0.77
KCNQ3O43525 AP005117.1-202ENST00000581724 1908 ntBASIC19.87■□□□□ 0.77
KCNQ3O43525 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KCNQ3O43525 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.87■□□□□ 0.77
KCNQ3O43525 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
KCNQ3O43525 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.87■□□□□ 0.77
KCNQ3O43525 AC114812.1-204ENST00000449669 728 ntBASIC19.87■□□□□ 0.77
KCNQ3O43525 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.87■□□□□ 0.77
KCNQ3O43525 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.87■□□□□ 0.77
KCNQ3O43525 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.87■□□□□ 0.77
KCNQ3O43525 C2orf69P2-201ENST00000562032 1123 ntBASIC19.87■□□□□ 0.77
KCNQ3O43525 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.87■□□□□ 0.77
KCNQ3O43525 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KCNQ3O43525 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.87■□□□□ 0.77
KCNQ3O43525 AL513523.2-202ENST00000427283 2040 ntBASIC19.86■□□□□ 0.77
KCNQ3O43525 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KCNQ3O43525 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNQ3O43525 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms