Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.87■□□□□ 0.45
ATP2A1O14983 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.87■□□□□ 0.45
ATP2A1O14983 AC025279.2-201ENST00000569730 653 ntBASIC17.87■□□□□ 0.45
ATP2A1O14983 AC244669.2-201ENST00000612320 853 ntBASIC17.87■□□□□ 0.45
ATP2A1O14983 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ATP2A1O14983 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ATP2A1O14983 AC092364.2-201ENST00000596710 2692 ntBASIC17.86■□□□□ 0.45
ATP2A1O14983 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP2A1O14983 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ATP2A1O14983 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP2A1O14983 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.86■□□□□ 0.45
ATP2A1O14983 AP001582.1-201ENST00000525856 295 ntBASIC17.86■□□□□ 0.45
ATP2A1O14983 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.86■□□□□ 0.45
ATP2A1O14983 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.86■□□□□ 0.45
ATP2A1O14983 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP2A1O14983 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP2A1O14983 AC008687.7-202ENST00000637404 953 ntBASIC17.86■□□□□ 0.45
ATP2A1O14983 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ATP2A1O14983 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ATP2A1O14983 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP2A1O14983 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP2A1O14983 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.86■□□□□ 0.45
ATP2A1O14983 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATP2A1O14983 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
ATP2A1O14983 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATP2A1O14983 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP2A1O14983 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
ATP2A1O14983 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A1O14983 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A1O14983 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A1O14983 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A1O14983 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP2A1O14983 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A1O14983 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A1O14983 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A1O14983 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A1O14983 DUX4L45-201ENST00000566406 1057 ntBASIC17.85■□□□□ 0.45
ATP2A1O14983 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A1O14983 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.85■□□□□ 0.45
ATP2A1O14983 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP2A1O14983 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP2A1O14983 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A1O14983 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A1O14983 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
ATP2A1O14983 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A1O14983 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ATP2A1O14983 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A1O14983 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ATP2A1O14983 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms