Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 AC005229.1-201ENST00000392885 409 ntBASIC15.54■□□□□ 0.08
TLR4O00206 C1QBPP1-201ENST00000400117 770 ntBASIC15.54■□□□□ 0.08
TLR4O00206 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TLR4O00206 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.54■□□□□ 0.08
TLR4O00206 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 HNRNPUP1-201ENST00000554987 333 ntBASIC15.54■□□□□ 0.08
TLR4O00206 AC120045.2-201ENST00000567334 178 ntBASIC15.54■□□□□ 0.08
TLR4O00206 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.54■□□□□ 0.08
TLR4O00206 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.54■□□□□ 0.08
TLR4O00206 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 AL596257.1-201ENST00000641463 2694 ntBASIC15.54■□□□□ 0.08
TLR4O00206 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TLR4O00206 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TLR4O00206 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.53■□□□□ 0.08
TLR4O00206 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TLR4O00206 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.53■□□□□ 0.08
TLR4O00206 AC093525.8-201ENST00000624099 1342 ntBASIC15.53■□□□□ 0.08
TLR4O00206 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TLR4O00206 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TLR4O00206 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TLR4O00206 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.53■□□□□ 0.08
TLR4O00206 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TLR4O00206 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.53■□□□□ 0.08
TLR4O00206 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.53■□□□□ 0.08
TLR4O00206 VDAC1P7-201ENST00000462417 847 ntBASIC15.53■□□□□ 0.08
TLR4O00206 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.53■□□□□ 0.08
TLR4O00206 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.53■□□□□ 0.08
TLR4O00206 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TLR4O00206 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.53■□□□□ 0.08
TLR4O00206 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.53■□□□□ 0.08
TLR4O00206 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.53■□□□□ 0.08
TLR4O00206 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.53■□□□□ 0.08
TLR4O00206 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TLR4O00206 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.53■□□□□ 0.08
TLR4O00206 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TLR4O00206 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.52■□□□□ 0.08
TLR4O00206 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.52■□□□□ 0.08
TLR4O00206 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TLR4O00206 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.52■□□□□ 0.08
TLR4O00206 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.52■□□□□ 0.08
TLR4O00206 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TLR4O00206 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.52■□□□□ 0.08
TLR4O00206 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TLR4O00206 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
TLR4O00206 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TLR4O00206 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.52■□□□□ 0.08
TLR4O00206 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.52■□□□□ 0.08
TLR4O00206 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms