Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SLC25A1P2-201ENST00000430693 912 ntBASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CCR12P-201ENST00000446203 998 ntBASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SNORA78-201ENST00000459373 127 ntBASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AP000525.1-201ENST00000608286 694 ntBASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AC073548.1-201ENST00000624088 1882 ntBASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AC010240.3-201ENST00000607688 395 ntBASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AC010654.1-201ENST00000615722 808 ntBASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AC102953.2-201ENST00000609755 3026 ntBASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AOC4P-203ENST00000566825 2289 ntBASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TSPY17P-201ENST00000450329 467 ntBASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.71□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 FITM1-202ENST00000559294 800 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms