Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 AL512356.2-201ENST00000546955 174 ntBASIC12.65□□□□□ -0.38
SRRM4A7MD48 AC027612.4-201ENST00000605371 583 ntBASIC12.65□□□□□ -0.38
SRRM4A7MD48 AL596442.2-201ENST00000610240 980 ntBASIC12.65□□□□□ -0.38
SRRM4A7MD48 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.65□□□□□ -0.38
SRRM4A7MD48 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SRRM4A7MD48 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.39
SRRM4A7MD48 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SRRM4A7MD48 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.65□□□□□ -0.39
SRRM4A7MD48 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
SRRM4A7MD48 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AC023024.2-201ENST00000623561 1993 ntBASIC12.64□□□□□ -0.39
SRRM4A7MD48 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AL589739.1-201ENST00000607720 493 ntBASIC12.64□□□□□ -0.39
SRRM4A7MD48 LINC00628-201ENST00000628516 1289 ntBASIC12.64□□□□□ -0.39
SRRM4A7MD48 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.64□□□□□ -0.39
SRRM4A7MD48 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms