Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01546A6NGU7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC007787.1-201ENST00000588095 1583 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 MRPL20P1-201ENST00000400819 433 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC136632.2-201ENST00000512891 861 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 MIR3180-1-201ENST00000580374 94 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 MIR3180-3-201ENST00000584616 94 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC025062.2-201ENST00000605477 670 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC107918.4-202ENST00000641623 219 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC130686.1-201ENST00000622936 2466 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC068587.6-202ENST00000641839 5619 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC005332.1-201ENST00000577698 1310 ntBASIC11.04□□□□□ -0.64
LINC01546A6NGU7 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01546A6NGU7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms