Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 AC069224.1-201ENST00000566372 1715 ntBASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 DRD5P1-201ENST00000456605 1438 ntBASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3FA6NER0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TBC1D3FA6NER0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TBC1D3FA6NER0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TBC1D3FA6NER0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TBC1D3FA6NER0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TBC1D3FA6NER0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 AC026410.3-201ENST00000514280 936 ntBASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.58■□□□□ 0.08
TBC1D3FA6NER0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AC006449.5-201ENST00000610658 2098 ntBASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 LINC02447-202ENST00000501888 2146 ntBASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AP001582.1-201ENST00000525856 295 ntBASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AC005252.2-201ENST00000624630 1141 ntBASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 MSTO2P-201ENST00000314835 1709 ntBASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TBC1D3FA6NER0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TBC1D3FA6NER0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms