Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 SLC22A20-204ENST00000530038 1673 ntBASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 AJ011931.1-201ENST00000618749 2492 ntBASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 C20orf181-201ENST00000623918 480 ntBASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4B1Q9Y6B7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 C8orf49-201ENST00000525043 1968 ntBASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 HMGA1P7-201ENST00000406908 502 ntBASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 UPF3AP3-201ENST00000420996 769 ntBASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 MKNK2P1-201ENST00000437526 628 ntBASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 AC140658.5-201ENST00000438532 169 ntBASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4B1Q9Y6B7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms