Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.91■□□□□ 0.62
DENND2AQ9ULE3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 ACKR1-201ENST00000368121 1240 ntBASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 AC012441.1-201ENST00000446669 685 ntBASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 AL355864.2-201ENST00000447420 863 ntBASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 BCRP2-202ENST00000447763 634 ntBASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 BCRP6-201ENST00000510112 632 ntBASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 BCRP7-201ENST00000511549 544 ntBASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 AC104989.1-201ENST00000519711 778 ntBASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 COX11-210ENST00000639671 696 ntBASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DENND2AQ9ULE3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
DENND2AQ9ULE3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.89■□□□□ 0.62
DENND2AQ9ULE3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
DENND2AQ9ULE3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DENND2AQ9ULE3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
DENND2AQ9ULE3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.89■□□□□ 0.62
DENND2AQ9ULE3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DENND2AQ9ULE3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 AC007950.2-201ENST00000615045 2347 ntBASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 ANKRD19P-201ENST00000338192 862 ntBASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 RPS2P32-201ENST00000439199 892 ntBASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 AC133552.6-201ENST00000613406 534 ntBASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 AC134312.5-201ENST00000568031 1313 ntBASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DENND2AQ9ULE3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 KRT223P-202ENST00000449164 1292 ntBASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 AC022137.2-201ENST00000503482 481 ntBASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DENND2AQ9ULE3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms